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Director · Diploma in Clinical Epidemiology · Launching 2027

Dr. Diego Halabi

DDS, PhD in Medical Sciences

Head of the Department of Dentistry | Universidad Austral de Chile.

Clinician-scientist & developer, turning translational research and clinical epidemiology into tools that ship.

Dr. Diego Halabi

01.Profile

I'm a clinician-scientist working at the intersection of chronobiology, metabolic physiology, and systemic health. For over a decade I've studied how circadian disruption during pregnancy (chronodisruption) programs metabolic and cardiovascular disease in the offspring (and how maternal melatonin can reverse it). This work has been published in journals such as the Journal of Physiology, Journal of Pineal Research, and Frontiers in Endocrinology.

Fluorescent adipocytes

Trained as a dentist and now Head of the Department of Dentistry, I connect oral and systemic health through the perio-systemic axis, the biological link between periodontal disease, obesity, and adipose-tissue inflammation.

In parallel, I build and deploy the software that supports this work, from automated assessment tools and reproducible-research platforms to the Linux infrastructure that runs them, bringing engineering rigor to academic and clinical workflows.

02.research_analytics.R

Cosinor model fit in RStudio
Cosinor model fit in R. Quantifying circadian rhythms.

Scientific Design & Methodology

Leadership in translational and epidemiological research. Design of clinical trials, observational studies, and systematic reviews (Cochrane certified).

Statistical Analysis & Modeling

End-to-end quantitative analysis, from exploratory data analysis to complex multivariate and nonlinear modeling (logistic regression, cosinor and sinusoidal models for circadian rhythms). Reproducible, fully scripted workflows in R (tidyverse) and Python, with RMarkdown and LaTeX.

Biomedical Sciences & Physiology

Solid experience in chronobiology, metabolic physiology, and fetal programming studies.

Laboratory & Surgical Techniques

Advanced proficiency in cell culture and experimental surgery techniques (in vivo models in humans and rodents).

These methods underpin a sustained record of peer-reviewed work (see Publications).

03.engineering_stack

diego@halabi-node: ~/stack
$ cat languages_frameworks.txt
Python FastAPI CustomTkinter SQL (PostgreSQL / SQLite)
$ cat applied_engineering.txt
Computer Vision (OpenCV / OMR) Cryptography (Fernet, Ed25519) LLM Integration (Gemini, Claude) SSE Streaming
$ cat infrastructure.txt
Linux (Arch Linux) Headless Servers CI/CD Vercel + Railway
$
EvaLumina application interface
EvaLumina. Automated OMR exam grading.

04.projects/

v1.2.0

EvaLumina

Multiplatform automated evaluation system with Optical Mark Recognition (OMR) and encrypted answer keys (developed in Python).

Python OpenCV EdTech
Live

AI Assistant for Epidemiology Teaching

Active-learning platform for Clinical Epidemiology. Computes a deterministic vocational profile and streams AI-generated feedback (Gemini/Claude), built as an open, reproducible educational-research study with informed consent.

FastAPI LLM Open Science
MVP

Clinical Sterilization Platform

MVP for the comprehensive management of the clinical sterilization center, autonomously deployed on local headless Linux infrastructure.

Linux Bash Management

05.service.log

Awards

Sleep Science Prize, Best Presentation. XV Latin American Symposium on Chronobiology (Brazilian Sleep Society, 2019).

Editorial & Peer Review

Review Editor, Frontiers in Oral Health. Grant and scholarship evaluator for ANID (Medical Sciences panel). Reviewer for BMC Oral Health, Frontiers in Endocrinology, and BMJ Case Reports.

Academic Leadership

Head of the Department of Dentistry (Instituto de Odontoestomatología). CNA accreditation committee. Former Director, Medical Research Honors Program.

Teaching & Mentorship

Supervised 12+ undergraduate, master's, and MBA theses across Dentistry, Medicine, and Science.

Frequent invited speaker at national and international scientific meetings.

06.publications.json

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07.grants.json

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Research Funding